PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1095s0050.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 144aa    MW: 16511.5 Da    PI: 7.5947
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1095s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-162063148
                     AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                            s+y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++ 
  SapurV1A.1095s0050.1.p 20 SRYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDL 63
                            7899******.**********865...5******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.7E-92063IPR001471AP2/ERF domain
CDDcd000185.32E-252078No hitNo description
SuperFamilySSF541713.53E-182079IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.2E-252178IPR001471AP2/ERF domain
SMARTSM003803.9E-252185IPR001471AP2/ERF domain
PROSITE profilePS5103220.4292179IPR001471AP2/ERF domain
PRINTSPR003675.6E-92233IPR001471AP2/ERF domain
PRINTSPR003675.6E-94460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MENFPPFIYR NPKRSSRQSS RYLGVRRRPW GRYAAEIRNP YTKERHWLGT FDTAEEAAVA  60
YDLSSISFSG IEKARTNFYY PLFRHPSPPQ EAPPPPLPPP EMEKGDQLSM EDTGTAQDDE  120
SIVIASILQR FCQPTSYSFH PQI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-131878262ATERF1
3gcc_A2e-131878262ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011002516.17e-87PREDICTED: ethylene-responsive transcription factor LEP-like
RefseqXP_011016403.17e-87PREDICTED: ethylene-responsive transcription factor LEP-like
SwissprotQ3E7038e-30ERF88_ARATH; Ethylene-responsive transcription factor ERF088
TrEMBLB9IQN25e-67B9IQN2_POPTR; Uncharacterized protein
STRINGPOPTR_0019s11780.12e-66(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145131317
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.18e-30ERF family protein